SPH::AlievPanfilowModel Class Reference

The simplest Electrophysiology Reaction model, which reduces the complex of array of ion currents to two variables that describe excitation and recovery. More...

#include <electro_physiology.h>

Inherits SPH::ElectroPhysiologyReaction.

Public Member Functions
	AlievPanfilowModel (Real k_a, Real c_m, Real k, Real a, Real b, Real mu_1, Real mu_2, Real epsilon)
Public Member Functions inherited from SPH::ElectroPhysiologyReaction
	ElectroPhysiologyReaction (Real k_a)
void	initializeElectroPhysiologyReaction ()
Public Member Functions inherited from SPH::BaseReactionModel
	BaseReactionModel (StdVec< std::string > species_name_list)
StdVec< std::string >	getSpeciesNameList ()

Protected Member Functions
virtual Real	getProductionRateIonicCurrent (StdVec< StdLargeVec< Real >> &species, size_t particle_i) override
virtual Real	getLossRateIonicCurrent (StdVec< StdLargeVec< Real >> &species, size_t particle_i) override
virtual Real	getProductionRateGateVariable (StdVec< StdLargeVec< Real >> &species, size_t particle_i) override
virtual Real	getLossRateGateVariable (StdVec< StdLargeVec< Real >> &species, size_t particle_i) override
Protected Member Functions inherited from SPH::ElectroPhysiologyReaction
virtual Real	getProductionActiveContractionStress (StdVec< StdLargeVec< Real >> &species, size_t particle_i)
virtual Real	getLossRateActiveContractionStress (StdVec< StdLargeVec< Real >> &species, size_t particle_i)

Protected Attributes
Real	k_
Real	a_
Real	b_
Real	mu_1_
Real	mu_2_
Real	epsilon_
Real	c_m_
Protected Attributes inherited from SPH::ElectroPhysiologyReaction
Real	k_a_
size_t	voltage_
size_t	gate_variable_
size_t	active_contraction_stress_
Protected Attributes inherited from SPH::BaseReactionModel
StdVec< std::string >	species_name_list_
std::map< std::string, size_t >	species_indexes_map_
std::string	reaction_model_

Additional Inherited Members
Public Attributes inherited from SPH::BaseReactionModel
IndexVector	reactive_species_
StdVec< ReactionFunctor >	get_production_rates_
StdVec< ReactionFunctor >	get_loss_rates_
Protected Types inherited from SPH::BaseReactionModel
typedef std::function< Real(StdVec< StdLargeVec< Real >> &, size_t particle_i)>	ReactionFunctor

Detailed Description

The simplest Electrophysiology Reaction model, which reduces the complex of array of ion currents to two variables that describe excitation and recovery.

Member Data Documentation

k_

Real SPH::AlievPanfilowModel::k_

protected

Parameters for two variable cell model.

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The documentation for this class was generated from the following files:

• SPHINXsys/src/shared/particle_dynamics/electro_physiology/electro_physiology.h
• SPHINXsys/src/shared/particle_dynamics/electro_physiology/electro_physiology.cpp